👔 Biography

I am Huidong Ma, a Ph.D. candidate in Computer Science and Technology at Nankai University, advised by Prof. Xiaoguang Liu and Prof. Gang Wang. Currently, I am a visiting student at the College of Computing and Data Science, Nanyang Technological University, working with Prof. Wentong Cai (Sept. 2025 – Aug. 2026). My research interests include Data Compression, Deep Learning, and High-Performance Computing. Please feel free to reach out if you are interested in my research.

📄 Publications

$\dagger$: Equal Contribution   *: Corresponding Author

First & Co-First Author Publications

• MSDZip: Universal Lossless Compression for Multi-source Data via Stepwise-parallel and Learning-based Prediction
  Huidong Ma$^\dagger$, Hui Sun$^\dagger$, Liping Yi, Yanfeng Ding, Xiaoguang Liu^*, Gang Wang^*
  The ACM Web Conference (WWW), 2025
• Multi-source Data Lossless Compression via Parallel Expansion Mapping and xLSTM
  Huidong Ma, Hui Sun, Liping Yi, Xiaoguang Liu^*, Gang Wang^*
  International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025
• A Survey and Benchmark Evaluation for Neural-Network-Based Lossless Universal Compressors Toward Multi-Source Data
  Hui Sun$^\dagger$, Huidong Ma$^\dagger$, Feng Ling, Haonan Xie, Yongxia Sun, Liping Yi, Meng Yan^*, Cheng Zhong, Xiaoguang Liu, Gang Wang^*
  Frontiers of Computer Science (FCS), 2025
• LRCB: A Comprehensive Benchmark Evaluation of Reference-free Lossless Compression Tools for Genomics Sequencing Long Reads Data
  Hui Sun$^\dagger$, Huidong Ma$^\dagger$, Yingfeng Zheng, Haonan Xie, Meng Yan, Cheng Zhong, Xiaoguang Liu^*, Gang Wang^*
  Data Compression Conference (DCC), 2024
• SR2C: A Structurally Redundant Short Reads Collapser for Optimizing DNA Data Compression
  Hui Sun$^\dagger$, Huidong Ma$^\dagger$, Yingfeng Zheng, Haonan Xie, Xiaofei Wang, Xiaoguang Liu^*, Gang Wang^*
  International Conference on Parallel and Distributed Systems (ICPADS), 2023
• ricME: Long-Read Based Mobile Element Variant Detection Using Sequence Realignment and Identity Calculation
  Huidong Ma, Cheng Zhong^*, Hui Sun, Danyang Chen, Haixiang Lin
  International Symposium on Bioinformatics Research and Applications (ISBRA), 2023
• cnnLSV: detecting structural variants by encoding long-read alignment information and convolutional neural network
  Huidong Ma, Cheng Zhong^*, Danyang Chen, Haofa He, Feng Yang
  BMC Bioinformatics, 2023

Collaborative Publications

• PMKLC: Parallel Multi-Knowledge Learning-based Lossless Compression for Large-Scale Genomics Database
  Hui Sun, Yanfeng Ding, Liping Yi, Huidong Ma, Gang Wang^*, Xiaoguang Liu^*, Cheng Zhong, Wentong Cai
  ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD), 2025
• Adaptive Lossless Compression for Genomics Data by Multiple (s, k)-mer Encoding and XLSTM
  Hui Sun$^\dagger$, Yanfeng Ding$^\dagger$, Liping Yi, Huidong Ma, Haonan Xie, Gang Wang^*, Xiaoguang Liu^*
  International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025
• Genomics Data Lossless Compression with (s,k)-mer Encoding and Deep Neural Networks
  Hui Sun$^\dagger$, Liping Yi$^\dagger$, Huidong Ma, Yongxia Sun, Yingfeng Zheng, Wenwen Cui, Meng Yan, Xiaoguang Liu^*, Gang Wang^*
  Annual AAAI Conference on Artificial Intelligence (AAAI), 2025
• PQSDC: a parallel lossless compressor for quality scores data via sequences partition and Run-Length prediction mapping
  Hui Sun, Yingfeng Zheng, Haonan Xie, Huidong Ma, Cheng Zhong, Meng Yan, Xiaoguang Liu^*, Gang Wang^*
  Bioinformatics, 2024
• PMFFRC: a large-scale genomic short reads compression optimizer via memory modeling and redundant clustering
  Hui Sun, Yingfeng Zheng, Haonan Xie, Huidong Ma, Xiaoguang Liu^*, Gang Wang^*
  BMC Bioinformatics, 2023

🚩 Professional Activities

Reviewer for Journals

• Information Sciences, 2026
• IEEE Transactions on Network Science and Engineering, 2025
• GiGaScience, 2025
• Journal of Algorithms & Computational Technology, 2023

Reviewer for Conferences

• ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD), 2026
• The ACM Web Conference (WWW), 2025
• International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2025